| Class | Data Declaration command |
| Name | read csv |
| Arguments | <data file name> [noheader] [sep] <field_separator>] |
Reads a CSV format file containing data for pedigrees or unrelated individuals. The default is to expect a header row giving the column names. The default field separator is a comma. The type of each column ("a", "q", "m", "c") is inferred based on their contents, and used to declare the variables to Sib-pair, and to read the dataset. If the first five variable names in the header are "ped", "id", "fa", "mo", "sex", then the file is inferred to be a pedigree file, else it is treated as unrelated individual records.
Example:
clear out simple.csv echo a, 4,yes echo a, 2,no echo b, 1,x out read csv simple.csv noheader file delete simple.csv set cat lab write
See also:
| read pedigree | read Sib-pair pedigree file |
| read linkage | read pre-Makeped pedigree file |
| read ppd | read post-Makeped pedigree file |
| << (read cases) | Up to index | >> (read vcf) |