!
! Finnish families containing probands suffering from neuronal ceroid
! lipofuscinosis described in Savukoski et al AJHG 1994; 55: 695-701.
! Linkage disequilibrium mapping using 3 chromosome 13 loci
!
! D13S162 D13S160 D13S170
!
! 13q22-31 D13S162 -- 3cM -- D13S160 -- 3 cM -- D13S170 13q31-32
!
! Numbering of individuals runs as per Figure 1 generation by generation
! and left to right
!
set locus lincl aff
set locus oneperfam aff
set locus D13S162 marker
set locus D13S160 marker
set locus D13S170 marker
read pedigree inline
1  1  x x m n n 2 4 1 5 5  9  
1  2  x x f n n 4 5 3 5 5  7  
1  3  1 2 f y y 4 4 5 5 5  5  
1  4  1 2 m y n 4 4 5 5 5  5  
1  5  1 2 f n n 4 5 3 5 5  7  
1  6  1 2 f n n 2 4 1 3 7  9  
1  7  1 2 f n n 2 4 1 3 7  9  
2  1  x x m n n 4 8 2 5 3  5  
2  2  x x f n n 4 6 4 5 1  5  
2  3  1 2 m n n 6 8 2 4 1  3  
2  4  1 2 m n n 4 6 4 5 5  5  
2  5  1 2 f n n 6 8 2 4 1  3  
2  6  1 2 m n n 4 8 2 5 3  5  
2  7  1 2 m y y 4 4 5 5 5  5  
2  8  1 2 m y n 4 4 5 5 5  5  
2  9  1 2 f n n 4 8 2 5 3  5  
3  1  x x m n n x x x x x  x  
3  2  x x f n n x x x x x  x  
3  3  x x f n n 4 7 4 5 5  8  
3  4  1 2 m n n 4 7 4 5 5  6  
3  5  1 2 m n n 4 7 4 5 5  8  
3  6  x x f n n 3 4 4 5 5  7  
3  7  4 3 f n n 4 7 4 4 6  8  
3  8  4 3 f n n 4 7 4 4 6  8  
3  9  4 3 m y y 4 4 4 5 5  6  
3  10 5 6 m n n 4 7 4 5 5  8  
3  11 5 6 m y n 4 4 5 5 5  5  
4  1  x x m n n 4 8 3 5 5  8  
4  2  x x f n n 1 4 1 5 2  4  
4  3  1 2 m y y 4 4 5 5 2  5  
4  4  1 2 m n n 4 8 3 5 2  8  
5  1  x x m n n 4 5 1 5 6  10 
5  2  x x f n n 4 5 1 6 4  10 
5  3  1 2 f n n 4 4 1 1 10 10 
5  4  1 2 m n n 4 5 5 6 4  6  
5  5  1 2 f n n 4 4 1 5 6  10 
6  1  x x m n n 4 5 1 4 3  11 
6  2  x x f n n 4 4 2 5 3  10 
6  3  1 2 m y y 4 4 1 5 3  3  
6  4  1 2 m n n 4 4 1 2 3  10 
7  1  x x m n n 3 4 5 6 3  7  
7  2  x x f n n 4 6 2 5 4  7  
7  3  1 2 f n n 4 4 5 5 7  7  
7  4  1 2 f n n 4 6 2 5 4  7  
8  1  x x m n n x x x x x  x  
8  2  x x f n n 2 4 3 5 2  5  
8  3  1 2 f n n 2 4 3 5 2  5  
8  4  1 2 f y y 4 4 5 5 5  5  
8  5  1 2 m n n 1 4 1 5 5  8  
9  1  x x m n n 1 4 1 5 2  5  
9  2  x x f n n 4 7 2 5 5  5  
9  3  1 2 m n n 1 7 1 5 5  5  
9  4  1 2 f y y 4 7 5 5 2  5  
10 1  x x m n n 2 5 4 5 5  7  
10 2  x x f n n 4 7 2 5 5  7  
10 3  1 2 f n n 4 5 4 5 5  7  
10 4  1 2 f y y 2 4 5 5 5  5  
11 1  x x m n n 4 4 1 5 3  4  
11 2  x x f n n 2 4 5 6 4  4  
11 3  1 2 m y y 4 4 5 5 4  4  
11 4  1 2 f n n 2 4 5 6 4  4  
12 1  x x m n n 4 4 4 5 x  x  
12 2  x x f n n 3 4 1 2 x  x  
12 3  1 2 f y y 4 4 1 5 x  x  
13 1  x x m n n 4 4 3 5 x  x  
13 2  x x f n n 4 8 2 5 x  x  
13 3  1 2 m y y 4 4 5 5 x  x  
13 4  1 2 f y n 4 4 5 5 x  x  
14 1  x x m n n x x x x x  x  
14 2  x x f n n x x x x x  x  
14 3  1 2 f y y 4 4 5 5 x  x  
14 4  1 2 f n n x x x x x  x  
;;;;
run
